# STOCKHOLM 1.0
#=GF ID 2.40.10.10/FF/46324
#=GF DE Replicase polyprotein 1a
#=GF AC 2.40.10.10/FF/46324
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 16.989
#=GS P0C6W4/3353-3440  AC P0C6W4
#=GS P0C6W4/3353-3440  OS Pipistrellus bat coronavirus HKU5
#=GS P0C6W4/3353-3440  DE Replicase polyprotein 1ab
#=GS P0C6W4/3353-3440  DR GENE3D; c893ff9d2f1541c963a57b2d384de049/3353-3440; 
#=GS P0C6W4/3353-3440  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Pipistrellus bat coronavirus HKU5; 
#=GS P0C6W4/3353-3440  DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6T5/3353-3440  AC P0C6T5
#=GS P0C6T5/3353-3440  OS Pipistrellus bat coronavirus HKU5
#=GS P0C6T5/3353-3440  DE Replicase polyprotein 1a
#=GS P0C6T5/3353-3440  DR GENE3D; 0b06a63fae2c009a4391c1782317b19e/3353-3440; 
#=GS P0C6T5/3353-3440  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Pipistrellus bat coronavirus HKU5; 
#=GS P0C6T5/3353-3440  DR EC; 3.4.19.12; 3.4.22.69; 
#=GS P0C6W3/3306-3393  AC P0C6W3
#=GS P0C6W3/3306-3393  OS Tylonycteris bat coronavirus HKU4
#=GS P0C6W3/3306-3393  DE Replicase polyprotein 1ab
#=GS P0C6W3/3306-3393  DR GENE3D; c7d2f681657730ba06b34638b88fcb9e/3306-3393; 
#=GS P0C6W3/3306-3393  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Tylonycteris bat coronavirus HKU4; 
#=GS P0C6W3/3306-3393  DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6W1/3313-3400  AC P0C6W1
#=GS P0C6W1/3313-3400  OS Bat coronavirus (BtCoV/133/2005)
#=GS P0C6W1/3313-3400  DE Replicase polyprotein 1ab
#=GS P0C6W1/3313-3400  DR GENE3D; f2aaf872be358d037d210bc664e4ced0/3313-3400; 
#=GS P0C6W1/3313-3400  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Tylonycteris bat coronavirus HKU4; 
#=GS P0C6W1/3313-3400  DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6F7/3313-3400  AC P0C6F7
#=GS P0C6F7/3313-3400  OS Bat coronavirus (BtCoV/133/2005)
#=GS P0C6F7/3313-3400  DE Replicase polyprotein 1a
#=GS P0C6F7/3313-3400  DR GENE3D; 2f359ef34767c887f52c40b2c2f5394b/3313-3400; 
#=GS P0C6F7/3313-3400  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Tylonycteris bat coronavirus HKU4; 
#=GS P0C6F7/3313-3400  DR EC; 3.4.19.12; 3.4.22.69; 
#=GS P0C6T4/3306-3393  AC P0C6T4
#=GS P0C6T4/3306-3393  OS Tylonycteris bat coronavirus HKU4
#=GS P0C6T4/3306-3393  DE Replicase polyprotein 1a
#=GS P0C6T4/3306-3393  DR GENE3D; bd8bd803567895248f413f0030cc41c0/3306-3393; 
#=GS P0C6T4/3306-3393  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Tylonycteris bat coronavirus HKU4; 
#=GS P0C6T4/3306-3393  DR EC; 3.4.19.12; 3.4.22.69; 
#=GF TC 199.6 1.9E-63
#=GF SQ 6
P0C6W4/3353-3440          NCMVQVTCGSMTLNGLWLDNYVWCPRHVMCPADQLSDPNYDALLVSKTNLSFIVQKNVGAPANLRVVGHTMVGTLLKLTVESANPQTP
P0C6T5/3353-3440          NCMVQVTCGSMTLNGLWLDNYVWCPRHVMCPADQLSDPNYDALLVSKTNLSFIVQKNVGAPANLRVVGHTMVGTLLKLTVESANPQTP
P0C6W3/3306-3393          NCIVQVTCGSMTLNGLWLDNTVWCPRHIMCPADQLTDPNYDALLISKTNHSFIVQKHIGAQANLRVVAHSMVGVLLKLTVDVANPSTP
P0C6W1/3313-3400          NCIVQVTCGSMTLNGLWLDNTVWCPRHIMCPADQLTDPNYDALLISKTNHSFIVQKHIGAQANLRVVAHSMVGVLLKLTVDVANPSTP
P0C6F7/3313-3400          NCIVQVTCGSMTLNGLWLDNTVWCPRHIMCPADQLTDPNYDALLISKTNHSFIVQKHIGAQANLRVVAHSMVGVLLKLTVDVANPSTP
P0C6T4/3306-3393          NCIVQVTCGSMTLNGLWLDNTVWCPRHIMCPADQLTDPNYDALLISKTNHSFIVQKHIGAQANLRVVAHSMVGVLLKLTVDVANPSTP
#=GC scorecons            9969999999999999999949999996999999959999999969999499999956995999999595999599999964999499
#=GC scorecons_70         ********************_**************_*************_******_***_******_*_***_*******_***_**
#=GC scorecons_80         **_*****************_******_*******_********_****_******__**_******_*_***_******__***_**
#=GC scorecons_90         **_*****************_******_*******_********_****_******__**_******_*_***_******__***_**
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