# STOCKHOLM 1.0 #=GF ID 2.40.10.10/FF/10431 #=GF DE Genome polyprotein #=GF AC 2.40.10.10/FF/10431 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 44.229 #=GS Q02963/2040-2048_2130-2212_2239-2244 AC Q02963 #=GS Q02963/2040-2048_2130-2212_2239-2244 OS Potato virus Y strain Hungarian #=GS Q02963/2040-2048_2130-2212_2239-2244 DE Genome polyprotein #=GS Q02963/2040-2048_2130-2212_2239-2244 DR GENE3D; 98c37a5ab78796db44be347cd00096bf/2040-2048_2130-2212_2239-2244; #=GS Q02963/2040-2048_2130-2212_2239-2244 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS Q02963/2040-2048_2130-2212_2239-2244 DR EC; 2.7.7.48; 3.4.22.44; 3.4.22.45; #=GS P18247/2040-2048_2130-2212_2239-2244 AC P18247 #=GS P18247/2040-2048_2130-2212_2239-2244 OS Potato virus Y strain N #=GS P18247/2040-2048_2130-2212_2239-2244 DE Genome polyprotein #=GS P18247/2040-2048_2130-2212_2239-2244 DR GENE3D; 90a1894447bc1f7352950a0e522d22d3/2040-2048_2130-2212_2239-2244; #=GS P18247/2040-2048_2130-2212_2239-2244 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS P18247/2040-2048_2130-2212_2239-2244 DR EC; 2.7.7.48; 3.4.22.44; 3.4.22.45; #=GS K4HJR1/2024-2032_2114-2196_2223-2228 AC K4HJR1 #=GS K4HJR1/2024-2032_2114-2196_2223-2228 OS Potato virus Y #=GS K4HJR1/2024-2032_2114-2196_2223-2228 DE Polyprotein #=GS K4HJR1/2024-2032_2114-2196_2223-2228 DR GENE3D; 631d261f08a36504475a6edcb448a4fe/2024-2032_2114-2196_2223-2228; #=GS K4HJR1/2024-2032_2114-2196_2223-2228 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS Q85104/45-127_154-159 AC Q85104 #=GS Q85104/45-127_154-159 OS Potato virus Y #=GS Q85104/45-127_154-159 DE Polyprotein #=GS Q85104/45-127_154-159 DR GENE3D; fd1f4732154750d04f1091ec86065a37/45-127_154-159; #=GS Q85104/45-127_154-159 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS Q85274/534-542_624-706_733-738 AC Q85274 #=GS Q85274/534-542_624-706_733-738 OS Potato virus Y #=GS Q85274/534-542_624-706_733-738 DE Polyprotein #=GS Q85274/534-542_624-706_733-738 DR GENE3D; 226c2cfab7b0150e9af20df7c0169808/534-542_624-706_733-738; #=GS Q85274/534-542_624-706_733-738 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS D5J731/2163-2171_2253-2335_2362-2367 AC D5J731 #=GS D5J731/2163-2171_2253-2335_2362-2367 OS Sunflower chlorotic mottle virus #=GS D5J731/2163-2171_2253-2335_2362-2367 DE Polyprotein #=GS D5J731/2163-2171_2253-2335_2362-2367 DR GENE3D; a12d48eb5fb5498e8973a402b4c49807/2163-2171_2253-2335_2362-2367; #=GS D5J731/2163-2171_2253-2335_2362-2367 DR ORG; Viruses; Potyviridae; Potyvirus; Sunflower chlorotic mottle virus; #=GS I7AI77/6-14_96-178_205-210 AC I7AI77 #=GS I7AI77/6-14_96-178_205-210 OS Potato virus Y #=GS I7AI77/6-14_96-178_205-210 DE Nuclear inclusion protein-a protease #=GS I7AI77/6-14_96-178_205-210 DR GENE3D; a2758edb929308f7b759b14f892c1628/6-14_96-178_205-210; #=GS I7AI77/6-14_96-178_205-210 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS I6ZXN5/6-14_96-178_205-210 AC I6ZXN5 #=GS I6ZXN5/6-14_96-178_205-210 OS Potato virus Y #=GS I6ZXN5/6-14_96-178_205-210 DE Nuclear inclusion protein-a protease #=GS I6ZXN5/6-14_96-178_205-210 DR GENE3D; a2758edb929308f7b759b14f892c1628/6-14_96-178_205-210; #=GS I6ZXN5/6-14_96-178_205-210 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS G3GAQ1/616-624_706-788_815-820 AC G3GAQ1 #=GS G3GAQ1/616-624_706-788_815-820 OS Potato virus Y #=GS G3GAQ1/616-624_706-788_815-820 DE Polyprotein #=GS G3GAQ1/616-624_706-788_815-820 DR GENE3D; bd6d9c362824a7ac89f6182d00492da6/616-624_706-788_815-820; #=GS G3GAQ1/616-624_706-788_815-820 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS B3V833/268-276_358-440_467-472 AC B3V833 #=GS B3V833/268-276_358-440_467-472 OS Potato virus Y #=GS B3V833/268-276_358-440_467-472 DE Polyprotein #=GS B3V833/268-276_358-440_467-472 DR GENE3D; 2308e8323ab33491d10a149e39a1dee3/268-276_358-440_467-472; #=GS B3V833/268-276_358-440_467-472 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS K7DW11/1820-1828_1910-1992_2019-2024 AC K7DW11 #=GS K7DW11/1820-1828_1910-1992_2019-2024 OS Potato virus Y #=GS K7DW11/1820-1828_1910-1992_2019-2024 DE Polyprotein #=GS K7DW11/1820-1828_1910-1992_2019-2024 DR GENE3D; c4b0e2a1b462a7280975ed03de3bbb9b/1820-1828_1910-1992_2019-2024; #=GS K7DW11/1820-1828_1910-1992_2019-2024 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS K7DW80/2117-2199_2226-2231 AC K7DW80 #=GS K7DW80/2117-2199_2226-2231 OS Potato virus Y #=GS K7DW80/2117-2199_2226-2231 DE Polyprotein #=GS K7DW80/2117-2199_2226-2231 DR GENE3D; 9ca4f7cfe299b2e2585c083c3a0596c1/2117-2199_2226-2231; #=GS K7DW80/2117-2199_2226-2231 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS K4HFX1/2028-2032_2114-2196_2223-2228 AC K4HFX1 #=GS K4HFX1/2028-2032_2114-2196_2223-2228 OS Potato virus Y #=GS K4HFX1/2028-2032_2114-2196_2223-2228 DE Polyprotein #=GS K4HFX1/2028-2032_2114-2196_2223-2228 DR GENE3D; 4246184937b81fece614caeb885ed16d/2028-2032_2114-2196_2223-2228; #=GS K4HFX1/2028-2032_2114-2196_2223-2228 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GS V5SJ46/2040-2048_2130-2212_2239-2245 AC V5SJ46 #=GS V5SJ46/2040-2048_2130-2212_2239-2245 OS Bidens mosaic virus #=GS V5SJ46/2040-2048_2130-2212_2239-2245 DE Polyprotein #=GS V5SJ46/2040-2048_2130-2212_2239-2245 DR GENE3D; dc914c31b1e1a76866e885e8a39fc3be/2040-2048_2130-2212_2239-2245; #=GS V5SJ46/2040-2048_2130-2212_2239-2245 DR ORG; Viruses; Potyviridae; Potyvirus; Bidens mosaic virus; #=GS K4HJR4/2040-2048_2130-2212_2239-2244 AC K4HJR4 #=GS K4HJR4/2040-2048_2130-2212_2239-2244 OS Potato virus Y #=GS K4HJR4/2040-2048_2130-2212_2239-2244 DE Polyprotein #=GS K4HJR4/2040-2048_2130-2212_2239-2244 DR GENE3D; 1b939fc49a2389b51ead85baba459003/2040-2048_2130-2212_2239-2244; #=GS K4HJR4/2040-2048_2130-2212_2239-2244 DR ORG; Viruses; Potyviridae; Potyvirus; Potato virus Y; #=GF TC 198.4 1.1E-62 #=GF SQ 15 Q02963/2040-2048_2130-2212_2239-2244 RDFNPIAQTHFRAPVQNERICLVGTNFQEKHASSIITETSTTYNVPGSTFWKHWIETNDGHCGLPVVSTADGCLVGIHSLANNVQTTNYYSADTVLWG- P18247/2040-2048_2130-2212_2239-2244 RDFNPIAQTHFRAPTQNERICLVGTNFQEKYASSIITETSTTYNIPGSTFWKHWIETDNGHCGLPVVSTADGCIVGIHSLANNAHTTNYYSADTVLWG- K4HJR1/2024-2032_2114-2196_2223-2228 RDFNPIAQTHFRAPVQNERICLVGTNFQEKHASSIITETSTTYNVPGSTFWKHWIETNDGHCGLPVVSTADGCLVGIHSLANNVQTTNYYSADTVLWG- Q85104/45-127_154-159 ---------HFRAPIQNERICLVGTNFQEKHASSIITETSTTYNVPGSTFWKHWIETNDGHCGLPVVSTADGCLVGIHSLANNVQTTNYYSADTVLWG- Q85274/534-542_624-706_733-738 RDFNPIAQTHFRAPTQNERICLVGTNFQEKYASSIITEASTTYNIPGSTFWKHWIETDNGHCGLPVVSTADGCLVGIHSLANNAHTTNYYSADTVLWG- D5J731/2163-2171_2253-2335_2362-2367 RDYNPIAQAHFRSPKNNEKMCIVGSNFQEKSTSSTITETSATYMVPRSSFWKHWIATDDGHCGLPVVSTIDGKIIGIHSLANNSSSENYYAADTVVWG- I7AI77/6-14_96-178_205-210 RDFNPIAQTHFRAPTQNERVCLVGTNFQEKYASSIITETSTTYNIPGSTFWKHWIETDNGHCGLPVVSTTDGCLVGIHSLANNKHTTNYYSADTVLWG- I6ZXN5/6-14_96-178_205-210 RDFNPIAQTHFRAPTQNERVCLVGTNFQEKYASSIITETSTTYNIPGSTFWKHWIETDNGHCGLPVVSTTDGCLVGIHSLANNKHTTNYYSADTVLWG- G3GAQ1/616-624_706-788_815-820 RDFNPIAQTHFRAPTQNERVCLVGTNFQEKYASSIITETSTTYNIPGSTFWKHWIETDNGHCGLPVVSTTDGCLVGIHSLANNKHTTNYYSADTVLWG- B3V833/268-276_358-440_467-472 RDFNPIAQTHFRAPTQNERVCLVGTNFQEKYASSIITETSTTYNIPGSTFWKHWIETDNGHCGLPVVSTTDGCLVGIHSLANNKHTTNYYSADTVLWG- K7DW11/1820-1828_1910-1992_2019-2024 RDFNPIAQTHFRAPVQNERICLVGTNFQEKHASSIITETSTTYNVPGSTFWKHWIETNDGHCGLPVVSTADGCLVGIHSLANNVQTTNYYSADTVLWG- K7DW80/2117-2199_2226-2231 ---------HFRAPVQNERICLVGTNFQEKHASSIITETSTTYNVPGSTFWKHWIETNDGHCGLPVVSTADGCLVGIHSLANNVQTTNYYSADTVLWG- K4HFX1/2028-2032_2114-2196_2223-2228 ----XIAQTHFRAPIQNERICLVGTNFQEKHASSIITETSTTYNVPGSTFWKHWIETNDGHCGLPVVSTADGCLVGIHSLANNVQTTNYYSADTVLWG- V5SJ46/2040-2048_2130-2212_2239-2245 RDYNPIAQTHFRAPNRNERICLVGTNFQEKSVSSTVTETSATYAVPRSTFWKHWIATDDGHCGLPVVSTLDGNIIGLHSLANNSTSENYYAADTVVWGS K4HJR4/2040-2048_2130-2212_2239-2244 RDFNPIAQTHFRAPTQNERVCLVGTNFQEKYASSIITETSTTYNIPGSTFWKHWIETDNGHCGLPVVSTTDGCLVGIHSLANNQHTTNYYSADTVLWG- #=GC scorecons 443445554999793699869799799999569968998979957969799999969669999999999499567979999993466999699997990 #=GC scorecons_70 _________*****_***************_************_***********_*************_**_**********__*_***********_ #=GC scorecons_80 _________*****__***_**********__**_*****_**_**_********_*__**********_**__*********____***_****_**_ #=GC scorecons_90 _________***_*__**__*_**_*****__**_*****_**__*_*_******_*__**********_**___*_******____***_****_**_ //